CDS

Accession Number TCMCG007C06005
gbkey CDS
Protein Id XP_009133354.1
Location join(5832945..5834825,5834896..5835003,5835093..5835161,5835233..5835268,5835373..5835426,5835530..5835613)
Gene LOC103857855
GeneID 103857855
Organism Brassica rapa

Protein

Length 743aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009135106.3
Definition protein FAR1-RELATED SEQUENCE 1 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description FAR1 DNA-binding domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0042752        [VIEW IN EMBL-EBI]
GO:0042753        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGATTGATCTCGAAATGTCGTCAGGAGAATGTGATGATGATCAAAGGATCAACGAAGGTTTAGAGTTTGAATCCAAAGAGGAAGCCTTTGAGTTCTACAAAGGGTACGCTAAATTTATCGGTTTCAACACCATTATAAAAGCTAGCCGCCGTTCAAGAATGAGTGGGAAGTTCATCGACGCCAAGTTCGTTTGTACACGTTACGGAACCAAGAAAACAGATGAAGCAGAAGAAGAAGAAGACATAAACATCCCTCAAGCGAGAAAACGCGGTAGAAGAACAAACCTTTCTTCCTCCAAAACAGATTGTAAAGCCTGCTTACACGTCAAGAAAAGACAAGATGGGAGGTGGGTGATTCGCGCTTTGGTCAAAGAACATAACCACGAGACCTTCCCCTCTGGTCAAACCACTTCCATAAGAGAGTCTTGTGGACGTGGAAAGGAGATGAAAAGCAGCAGAAAGTTTCAAGCTTTGGAGGGTGGAGACGTTGAGAGACTCCTAAGCTTCTTTACTGATATGCAAGCTGAGAATCCTTTCTTCTTCTACGCCGTTGATCAGACTCTAAGAAGCGTCTTTTGGGTTGACGCAAAGGGGAGATTGGACTATGCTTGTTTCTCTGATGTTGTGTCTATAGACACTACGTTCGTCAAGAACGAGTATAAGCTTCCTCTTGTGGCGTTTATTGGAGTTAACCACCATGGACAGTGGTTGTTACTTGGTTGTGGACTGTTGTTAGACGATGAGTCTACTAAATCTGGATTCGTTTGGCTTTTTAAGTCATGGTTAAAGGCGATGAACGGACGTCAACCTAGAGTTATACTCACCAAACACGACCAGACCCTCAAAGAAGCTGTCTCTGAAGCTTTGCCAGCGTCTAGACATTGTTTTAACATGTATGATACTCTTGGTCAGATGTCTGAGAAGGTTGGTCAAGGCTTTGTAGATGAGATAAACGAAGCTATTTACGGTTCTTGCAAGGGAGATGAGTTTGAAGAGAGATGGTGTGAGGTGGTTGATAGGTTTGGTGTGAGAGACAATGATTGGCTCCGTTCTCTGTATGAAGATAGAGAGCATTGGGTTCCTGTGTATATGCAAGATGTTTCTCTGGCGGGGATGTGTAGTGCAGATTCTGTTTTGGATAAGTATATTCAAAGGAAAACCACTTTGAGAGCGTTTCTTGATCAGTACAAGAGGATGGTACAAGAGAGAGTTGAAGAGGAAGAGAAGGCTGAGATTGAGACGTTGTGTAAACAGCCTGGGTTGAAGTCTCCTTCACCGTTTGGGAAGCAGATGGCTGAGCTGTACACGCGCGAGATGTTCAAGAGGTTTCAGGTTGAGGTGTTGGGAGGTGTTGCTTGTCATCCGAAGATAGAAAGCGACGAGGGTAACAACAAGAAGATGACTTTCAGGGTTCAAGACTATGAGCAGAACCGTGCGTTCGTTGTGGTGTGGAGCTCTGAATCATCTGAAGTTGTCTGTTCGTGTAGATTGTTTGAGTTCAAAGGGTTTCTTTGTAGACACGCGATGATTGTTCTGCAGATGTCTGGAGAACTTAGTGTTCCTTCTCGGTATGTGTTGAAGCGTTGGAGAAAAGATGCGAGAAGGAGAGAAGCTGTTGAGTCTGATCTGATGTGTGGAGATTTAACTAAAGCTCAGCGGTATAAGGATCTTTGTCTCCGGTCTTTGAAGTTGAGTGAGGAAGCATCTTTATCTGAAGAGAGTTATAACGCTGTGATGAATGTGTTGAATGAAGCTTTTAGAAAGTGTGAGATCACAAGTAACGTGATCCACATTGTTGAAGAGTCAGACTCTGATGTAGCTCATGAAGAACATAACAACAACAACTCTTTTAATGAGAATGTGGCTGACACAGGACAGGAACATTCATTACATGAAGCCTGGAAAGAAACTGCTTTGCAAGAACAAAGACACCGTTACTCGATTCTTGACGACTACCTCAGCGCTCAACAAATGTCACATGAAATGGGACAAATAAGCATGATGGCCTCAAACCGAAATGGATATTCTACTTCCCATCAAAACATACACTCACTGGGACAATCCATAACACAGCAAAGGCTTTATGAAACTGATCAATTAAGTTTCAGACCAGATCAAGTTATGTATGAAAGACTTCAGGACATGGGACAGACAAGTTTTAGACATCATCCTCAGCAACATTGCGAGTCTTCAAAACATCAACAATCCAACAAGAATGTATCTCTCTGA
Protein:  
MEIDLEMSSGECDDDQRINEGLEFESKEEAFEFYKGYAKFIGFNTIIKASRRSRMSGKFIDAKFVCTRYGTKKTDEAEEEEDINIPQARKRGRRTNLSSSKTDCKACLHVKKRQDGRWVIRALVKEHNHETFPSGQTTSIRESCGRGKEMKSSRKFQALEGGDVERLLSFFTDMQAENPFFFYAVDQTLRSVFWVDAKGRLDYACFSDVVSIDTTFVKNEYKLPLVAFIGVNHHGQWLLLGCGLLLDDESTKSGFVWLFKSWLKAMNGRQPRVILTKHDQTLKEAVSEALPASRHCFNMYDTLGQMSEKVGQGFVDEINEAIYGSCKGDEFEERWCEVVDRFGVRDNDWLRSLYEDREHWVPVYMQDVSLAGMCSADSVLDKYIQRKTTLRAFLDQYKRMVQERVEEEEKAEIETLCKQPGLKSPSPFGKQMAELYTREMFKRFQVEVLGGVACHPKIESDEGNNKKMTFRVQDYEQNRAFVVVWSSESSEVVCSCRLFEFKGFLCRHAMIVLQMSGELSVPSRYVLKRWRKDARRREAVESDLMCGDLTKAQRYKDLCLRSLKLSEEASLSEESYNAVMNVLNEAFRKCEITSNVIHIVEESDSDVAHEEHNNNNSFNENVADTGQEHSLHEAWKETALQEQRHRYSILDDYLSAQQMSHEMGQISMMASNRNGYSTSHQNIHSLGQSITQQRLYETDQLSFRPDQVMYERLQDMGQTSFRHHPQQHCESSKHQQSNKNVSL